Search result

BaseInfo

ncRNA ID novel_zma_miR3799
Species Zea mays
Class miRNA
Genome position Chr4:25232562-25232663 [+]
Reference genome RefGen_v4
Source SRR2287031;SRR2287164;SRR2089698;SRR2089700;SRR2089701
Length 24
Mature sequence(if miRNA) 1 - AUAGGAUGUUUCCACUGGCGGUUU - 24
Stem-loop(if miRNA) --                       U   AACACA           A   U
  AUAGGAUGUUUCCACUGGCGGUU GGU      AACCGCCAGUG AAA U
  ||||||||||||||||||||||| |||      ||||||||||| |||
  UAUCCUACAAAGGUGACCGCCAA UCA      UUGGCGGUCAC UUU G
UU                       U   AUUCUA           C   A
Stem-loop sequence AUAGGAUGUUUCCACUGGCGGUUUGGUAACACAAACCGCCAGUGAAAAUUGAUUUCCACUGGCGGUUAUCUUAACUUAACCGCCAGUGGAAACAUCCUAUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ101180.1
ncRNA:24   UUUGGCGGUCACCUUUGUAGGAUA   1
  *|||||||||||||||=|||||||
targets:80   CAACCGCCAGUGGAAAUAUCCUAU   103

1.5 TSA: Zea mays contig36836, mRNA sequence NA coding protein psRNATarget