ncRNA ID | novel_zma_miR3799 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr4:25232562-25232663 [+] |
Reference genome | RefGen_v4 |
Source | SRR2287031;SRR2287164;SRR2089698;SRR2089700;SRR2089701 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUAGGAUGUUUCCACUGGCGGUUU - 24 |
Stem-loop(if miRNA) |
--                       U   AACACA           A   U   AUAGGAUGUUUCCACUGGCGGUU GGU      AACCGCCAGUG AAA U   ||||||||||||||||||||||| |||      ||||||||||| |||   UAUCCUACAAAGGUGACCGCCAA UCA      UUGGCGGUCAC UUU G UU                       U   AUUCUA           C   A |
Stem-loop sequence | AUAGGAUGUUUCCACUGGCGGUUUGGUAACACAAACCGCCAGUGAAAAUUGAUUUCCACUGGCGGUUAUCUUAACUUAACCGCCAGUGGAAACAUCCUAUUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EZ101180.1 |
|
1.5 | TSA: Zea mays contig36836, mRNA sequence | NA | coding protein | psRNATarget |