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BaseInfo

ncRNA ID	novel_zma_miR3794
Species	Zea mays
Class	miRNA
Genome position	Chr4:209504545-209504639 [+]
Reference genome	RefGen_v4
Source	SRR2287031;SRR2287159;SRR2287164;SRR2287165;SRR2089700;SRR2089702
Length	24
Mature sequence(if miRNA)	72 - AGGAACCGCAAGUAGAAAUACGAU - 95
Stem-loop(if miRNA)	--          G G      A                C  C        CGUAUUUCUA U GCGGUU CUUAAGAAAACCGCCA UA AAAUCA   |||||||||| | |||||| |||||||||||||||| || |||||U   GCAUAAAGAU A CGCCAA GAAUUCUUUUGGCGGU AU UUUAGG UA          G A      G                C  C
Stem-loop sequence	CGUAUUUCUAGUGGCGGUUACUUAAGAAAACCGCCACUACAAAUCAUGGAUUUCUACUGGCGGUUUUCUUAAGGAACCGCAAGUAGAAAUACGAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
HI407102.1	ncRNA:24   UAGCAUAAAGAUGAACGCCAAGGA   1   ||||-||||||||*|||||||||| targets:8   AUCG-AUUUCUACAUGCGGUUCCU   30 Target Full Sequence	1.5	Sequence 5227 from Patent EP2074227	NA	coding protein	psRNATarget
LQ239232.1	ncRNA:24   UAGCAUAAAGAUGAACGCCAAGGA   1   ||||-||||||||*|||||||||| targets:8   AUCG-AUUUCUACAUGCGGUUCCU   30 Target Full Sequence	1.5	Sequence 5227 from Patent EP2985353	NA	coding protein	psRNATarget
JB167563.1	ncRNA:24   UAGCAUAAAGAUGAACGCCAAGGA   1   ||||-||||||||*|||||||||| targets:8   AUCG-AUUUCUACAUGCGGUUCCU   30 Target Full Sequence	1.5	Sequence 5227 from Patent EP2559767	NA	coding protein	psRNATarget
HI403097.1	ncRNA:24   UAGCAUAAAGAUGAACGCCAAGGA   1   ||=|-||||||||*|||||||||| targets:49   AUUG-AUUUCUACAUGCGGUUCCU   71 Target Full Sequence	1.5	Sequence 1222 from Patent EP2074227	NA	coding protein	psRNATarget
JB163558.1	ncRNA:24   UAGCAUAAAGAUGAACGCCAAGGA   1   ||=|-||||||||*|||||||||| targets:49   AUUG-AUUUCUACAUGCGGUUCCU   71 Target Full Sequence	1.5	Sequence 1222 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235227.1	ncRNA:24   UAGCAUAAAGAUGAACGCCAAGGA   1   ||=|-||||||||*|||||||||| targets:49   AUUG-AUUUCUACAUGCGGUUCCU   71 Target Full Sequence	1.5	Sequence 1222 from Patent EP2985353	NA	coding protein	psRNATarget
BT055683.2	ncRNA:24   UAG-C-AUAAAGAUGAACGCCAAGGA   1   *||-|-||*|||||||||||||*||| targets:1113   CUCAGCUACUUCUACUUGCGGUACCU   1138 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0112J02 mRNA, complete cds	NA	coding protein	psRNATarget