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BaseInfo

ncRNA ID	novel_zma_miR3787
Species	Zea mays
Class	miRNA
Genome position	Chr3:159654087-159654138 [+]
Reference genome	RefGen_v4
Source	SRR2287031
Length	24
Mature sequence(if miRNA)	29 - GCGGAGGAACUCCCUGAUGACGGC - 52
Stem-loop(if miRNA)	--U       A   -       A  G    GUCGUCG GGA UUCCUUC CG U    ||||||| ||| ||||||| || A    CAGUAGU CCU AAGGAGG GC U CGG       C   C       C  G
Stem-loop sequence	UGUCGUCGAGGAUUCCUUCACGGUAUGCGCGGAGGAACUCCCUGAUGACGGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EZ516807.1	ncRNA:24   CGGCAGUAGUCCCUCAAGGAGGCG   1   ||||**=|||*||||||||||||| targets:275   GCCGAGGUCAAGGAGUUCCUCCGC   298 Target Full Sequence	3.0	TSA: Zea mays cultivar W22 CL199Contig1.betc, mRNA sequence	NA	coding protein	psRNATarget
DQ436920.1	ncRNA:24   CGGCAGUAGUCCCUCAAGGAGGCG   1   ||||**=|||*||||||||||||| targets:1027   GCCGAGGUCAAGGAGUUCCUCCGC   1050 Target Full Sequence	3.0	Zea mays ramosa 3 (RA3) mRNA, complete cds	NA	coding protein	psRNATarget
BT036738.1	ncRNA:24   CGGCAGUAGUCCCUCAAGGAGGCG   1   ||||**=|||*||||||||||||| targets:1149   GCCGAGGUCAAGGAGUUCCUCCGC   1172 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFb0134L02 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001112394.2	ncRNA:24   CGGCAGUAGUCCCUCAAGGAGGCG   1   ||||**=|||*||||||||||||| targets:1149   GCCGAGGUCAAGGAGUUCCUCCGC   1172 Target Full Sequence	3.0	Zea mays ramosa 3 (ra3), mRNA	NA	coding protein	psRNATarget
BT061039.1	ncRNA:24   CGGCAGUAGUCCCUCAAGGAGGCG   1   ||||**=|||*||||||||||||| targets:1263   GCCGAGGUCAAGGAGUUCCUCCGC   1286 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFb0089P18 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008653661.2	ncRNA:24   CGGCAGUAGUCCCUCAAGGAGGCG   1   ||||**=|||*||||||||||||| targets:1439   GCCGAGGUCAAGGAGUUCCUCCGC   1462 Target Full Sequence	3.0	PREDICTED: Zea mays ramosa 3 (ra3), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020540735.1	ncRNA:24   CGGCAGUAGUCCCUCAAGGAGGCG   1   ||||**=|||*||||||||||||| targets:1456   GCCGAGGUCAAGGAGUUCCUCCGC   1479 Target Full Sequence	3.0	PREDICTED: Zea mays ramosa 3 (ra3), transcript variant X2, mRNA	NA	coding protein	psRNATarget