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BaseInfo

ncRNA ID novel_zma_miR3783
Species Zea mays
Class miRNA
Genome position Chr3:72225594-72225780 [+]
Reference genome RefGen_v4
Source SRR2287031;SRR2287159;SRR2287160;SRR2287162;SRR2287163;SRR2287165;SRR2089700
Length 24
Mature sequence(if miRNA) 164 - UGAGAUAGUAGUAGUUUAGUGAGU - 187
Stem-loop(if miRNA) --         G   C                         C     C                       --------U   C    --UUUU   A
  UCACUAAAU ACU CUAUCUCAGUUGUUAUCAUGAAUGA UGAGA UAAAAAGAUGGAAUGACUAAGUU         GUU ACUU      CGU A
  ||||||||| ||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||         ||| ||||      ||| U
  AGUGAUUUG UGA GAUAGAGUUAAUAAUAGUAUUUAUU ACUCU AUUUUUCUACCUUACUGAUUCAA         CAA UGAA      GUA G
UG         A   U                         A     A                       UCACUCAUU   U    UUUUUU   C
Stem-loop sequence UCACUAAAUGACUCCUAUCUCAGUUGUUAUCAUGAAUGACUGAGACUAAAAAGAUGGAAUGACUAAGUUUGUUCACUUUUUUCGUAAUGCAUGUUUUUUAAGUUAACUUACUCACUAACUUAGUCAUUCCAUCUUUUUAAUCUCAAUUAUUUAUGAUAAUAAUUGAGAUAGUAGUAGUUUAGUGAGU