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BaseInfo

ncRNA ID osa-miR1862f
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source miRBase
Length 20
Mature sequence(if miRNA) NA - AUGAGGUUGGUUUAUUUUGG - NA
Stem-loop(if miRNA) C                     ----A  AAUGGAGUACA
 UUAAAAUAAACCAGCCUCGUA     AG           U
 |||||||||||||||||||||     ||           U
 GGUUUUAUUUGGUUGGAGUAU     CG           C
A                     AUGUA  AUCAUCACGAU
Stem-loop sequence CUUAAAAUAAACCAGCCUCGUAAAGAAUGGAGUACAUUCUAGCACUACUAGCAUGUAUAUGAGGUUGGUUUAUUUUGGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK111475.1
ncRNA:20   GGUUUUAUUUGGUUGGAGUA   1
  ||||||||||||||||||||
targets:1264   CCAAAAUAAACCAACCUCAU   1283

0.0 Oryza sativa Japonica Group cDNA clone:002-183-F05, full insert sequence NA coding protein psRNATarget
AK119335.1
ncRNA:20   GGUUUUAUUUGGUUGGAGUA   1
  ||||||||||||||||||||
targets:1094   CCAAAAUAAACCAACCUCAU   1113

0.0 Oryza sativa Japonica Group cDNA clone:001-131-C06, full insert sequence NA coding protein psRNATarget

Reference

1 PMID:21113019
"Identification and analysis of seven H(2)O(2)-responsive miRNAs and 32 new miRNAs in the seedlings of rice (Oryza sativa L. ssp. indica)";
Li T, Li H, Zhang YX, Liu JY;
Nucleic Acids Res. 39:2821-2833(2011).