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BaseInfo

ncRNA ID	novel_zma_miR3777
Species	Zea mays
Class	miRNA
Genome position	Chr3:52920082-52920130 [-]
Reference genome	RefGen_v4
Source	SRR2287031
Length	24
Mature sequence(if miRNA)	26 - UGCUAGUAGAAUUAGGUAGCUAAC - 49
Stem-loop(if miRNA)	--U         AU       C  A    GCUAGUAGA  UAGGUAG UA C    |||||||||  ||||||| || A    CGAUUAUCU  AUCUAUC AU A AAU         --       U  A
Stem-loop sequence	UGCUAGUAGAAUUAGGUAGCUAACAAAUAUCUAUCUAUCUAUUAGCUAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU975068.1	ncRNA:24   CAAUCGAUGGAUUAAGAUGAUCGU   1   ||||||||*|||||||*||||||| targets:2272   GUUAGCUAGCUAAUUCCACUAGCA   2295 Target Full Sequence	2.5	Zea mays clone 466506 mRNA sequence	NA	coding protein	psRNATarget
XM_008661484.2	ncRNA:24   CAAUCGAUGGAUUAAGAUGAUCGU   1   ||||||||*|||||||*||||||| targets:522   GUUAGCUAGCUAAUUCCACUAGCA   545 Target Full Sequence	2.5	PREDICTED: Zea mays putative receptor protein kinase ZmPK1 (LOC103638627), mRNA	NA	coding protein	psRNATarget
XM_020543506.1	ncRNA:24   CAAUCGAUGGAUUAAGAUGAUCGU   1   ||||*|||*||||||*|||||||| targets:581   GUUAACUAGCUAAUUGUACUAGCA   604 Target Full Sequence	2.5	PREDICTED: Zea mays putative RING zinc finger domain superfamily protein (LOC100216754), transcript variant X2, mRNA	NA	coding protein	psRNATarget
EU956751.1	ncRNA:24   CAAUCGAUGGAUUAAGAUGAUCGU   1   ||||*|||*||||||*|||||||| targets:763   GUUAACUAGCUAAUUGUACUAGCA   786 Target Full Sequence	2.5	Zea mays clone 1572581 mRNA sequence	NA	coding protein	psRNATarget
XM_020548417.1	ncRNA:24   CAAUCGAUGGAUUAAGAUGAUCGU   1   ||*|*|||*||||||||||||*|| targets:1856   GUGAACUAGCUAAUUCUACUAACA   1879 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103648954 (LOC103648954), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_020548416.1	ncRNA:24   CAAUCGAUGGAUUAAGAUGAUCGU   1   ||*|*|||*||||||||||||*|| targets:1856   GUGAACUAGCUAAUUCUACUAACA   1879 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103648954 (LOC103648954), transcript variant X3, mRNA	NA	coding protein	psRNATarget