ncRNA ID | novel_zma_miR3775 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr9:63602153-63602292 [+] |
Reference genome | RefGen_v4 |
Source | SRR1583944 |
Length | 24 |
Mature sequence(if miRNA) | 117 - AAAACCGCUAGUGGAAAUAUCAUU - 140 |
Stem-loop(if miRNA) |
-UCGCC               --    -CU        C    A    A A                 U G       AUUUCUACUAGCGGU  UAUU   AGAACCGC AGUG AAAU U AUUUCCACUGGCGGUUU C U       |||||||||||||||  ||||   |||||||| |||| |||| | ||||||||||||||||| |       UAAAGGUGAUCGCCA  AUAA   UUUUGGCG UCAC UUUA G UAAAGGUGACCGCCAAA G A UUACUA               AA    UUC        A    A    C A                 C A |
Stem-loop sequence | UCGCCAUUUCUACUAGCGGUUAUUCUAGAACCGCCAGUGAAAAUAUAAUUUCCACUGGCGGUUUUCGUAAGCAAACCGCCAGUGGAAAUAGCAUUUACACUAGCGGUUUUCUUAAUAAAACCGCUAGUGGAAAUAUCAUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EU950653.1 |
|
2.5 | Zea mays clone 506422 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
EU950653.1 |
|
2.5 | Zea mays clone 506422 mRNA sequence | NA | coding protein | psRNATarget |