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BaseInfo

ncRNA ID	novel_zma_miR3773
Species	Zea mays
Class	miRNA
Genome position	Chr3:68911866-68911945 [-]
Reference genome	RefGen_v4
Source	SRR2287031;SRR2287165;SRR2089708
Length	24
Mature sequence(if miRNA)	57 - GGAUCACGGGGGAUUGGAGGGGAU - 80
Stem-loop(if miRNA)	--            A                       GA   GGAUCACGGGGG UUGGAGGGGAUUGAGGGGGAAAU  A   |||||||||||| |||||||||||||||||||||||   CCUAGUGCUCCC AACCUCCCCUAACUCCCCCUUUA  C GC            C                       AU
Stem-loop sequence	GGAUCACGGGGGAUUGGAGGGGAUUGAGGGGGAAAUGAACUAAUUUCCCCCUCAAUCCCCUCCAACCCCUCGUGAUCCCG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JB163762.1	ncRNA:24   UAGGGGAGGUUAGGGGGCACUAGG   1   |||||||||||||||||||||||| targets:76   AUCCCCUCCAAUCCCCCGUGAUCC   99 Target Full Sequence	0.0	Sequence 1426 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235431.1	ncRNA:24   UAGGGGAGGUUAGGGGGCACUAGG   1   |||||||||||||||||||||||| targets:76   AUCCCCUCCAAUCCCCCGUGAUCC   99 Target Full Sequence	0.0	Sequence 1426 from Patent EP2985353	NA	coding protein	psRNATarget
HI403301.1	ncRNA:24   UAGGGGAGGUUAGGGGGCACUAGG   1   |||||||||||||||||||||||| targets:76   AUCCCCUCCAAUCCCCCGUGAUCC   99 Target Full Sequence	0.0	Sequence 1426 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235420.1	ncRNA:24   UAGGGGAGGUUAGGGGGCACUAGG   1   |||||||||||||||||||||||| targets:79   AUCCCCUCCAAUCCCCCGUGAUCC   102 Target Full Sequence	0.0	Sequence 1415 from Patent EP2985353	NA	coding protein	psRNATarget
HI403290.1	ncRNA:24   UAGGGGAGGUUAGGGGGCACUAGG   1   |||||||||||||||||||||||| targets:79   AUCCCCUCCAAUCCCCCGUGAUCC   102 Target Full Sequence	0.0	Sequence 1415 from Patent EP2074227	NA	coding protein	psRNATarget
JB163751.1	ncRNA:24   UAGGGGAGGUUAGGGGGCACUAGG   1   |||||||||||||||||||||||| targets:79   AUCCCCUCCAAUCCCCCGUGAUCC   102 Target Full Sequence	0.0	Sequence 1415 from Patent EP2559767	NA	coding protein	psRNATarget
HI403493.1	ncRNA:24   UAGGGGAGGUUAGG-GGGCACUAGG   1   ||||||||||||||-|||||||||| targets:41   AUCCCCUCCAAUCCUCCCGUGAUCC   65 Target Full Sequence	3.0	Sequence 1618 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235623.1	ncRNA:24   UAGGGGAGGUUAGG-GGGCACUAGG   1   ||||||||||||||-|||||||||| targets:41   AUCCCCUCCAAUCCUCCCGUGAUCC   65 Target Full Sequence	3.0	Sequence 1618 from Patent EP2985353	NA	coding protein	psRNATarget
JB163954.1	ncRNA:24   UAGGGGAGGUUAGG-GGGCACUAGG   1   ||||||||||||||-|||||||||| targets:41   AUCCCCUCCAAUCCUCCCGUGAUCC   65 Target Full Sequence	3.0	Sequence 1618 from Patent EP2559767	NA	coding protein	psRNATarget
EU945995.1	ncRNA:24   UAGGGGAGGUUAGGG-GGCACUAGG   1   |***|||||||||||-||||||||| targets:383   AGAGCCUCCAAUCCCUCCGUGAUCC   407 Target Full Sequence	3.0	Zea mays clone 293035 mRNA sequence	NA	coding protein	psRNATarget