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BaseInfo

ncRNA ID novel_zma_miR3772
Species Zea mays
Class miRNA
Genome position Chr3:102181317-102181398 [-]
Reference genome RefGen_v4
Source SRR2287031;SRR2287164;SRR5451003;SRR5451005;SRR1997866;SRR2089698;SRR2089700;SRR2089704
Length 22
Mature sequence(if miRNA) 61 - UAUUCCAAGAACAUAAGAGGCU - 82
Stem-loop(if miRNA) ---UAUUC  AG    U      C    -C  A  -U   UCA
        CA  AACA AAGAGG UUCU  CC UG  CUU   U
        ||  |||| |||||| ||||  || ||  |||
        GU  UUGU UUUUCC AAGA  GG GC  GAA   A
AGAUAACC  CU    -      A    AA  A  UU   UCU
Stem-loop sequence UAUUCCAAGAACAUAAGAGGCUUCUCCCAUGUCUUUCAUAUCUAAGUUCGAGGAAAGAAACCUUUUUGUUUCUGCCAAUAGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AY110138.1
ncRNA:22   UCGGAGAAUACAAGAACCUUAU   1
  ***|||*|||||||||||||||
targets:3339   NNNCUCCUAUGUUCUUGGAAUA   3360

1.0 Zea mays CL1610_1 mRNA sequence NA coding protein psRNATarget