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BaseInfo

ncRNA ID	novel_zma_miR3771
Species	Zea mays
Class	miRNA
Genome position	Chr3:111711894-111711955 [-]
Reference genome	RefGen_v4
Source	SRR2287031
Length	24
Mature sequence(if miRNA)	39 - AUAGCACUCGGCAGAGAAGGAACA - 62
Stem-loop(if miRNA)	--                   GAAC   U G   AUAGCACUCGGCAGAGAAG    ACC G G   |||||||||||||||||||    ||| |   UGUUGUGAGCCGUUUUUUC    UGG C C AG                   GAAA   C A
Stem-loop sequence	AUAGCACUCGGCAGAGAAGGAACACCUGGGCACCGGUAAAGCUUUUUUGCCGAGUGUUGUGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JB167528.1	ncRNA:24   ACAAGGAAGAGACGGCUCACGAUA   1   *|*|=|*|||=||||||||||||| targets:10   AGAUUCGUCUUUGCCGAGUGCUAU   33 Target Full Sequence	2.0	Sequence 5192 from Patent EP2559767	NA	coding protein	psRNATarget
LQ239197.1	ncRNA:24   ACAAGGAAGAGACGGCUCACGAUA   1   *|*|=|*|||=||||||||||||| targets:10   AGAUUCGUCUUUGCCGAGUGCUAU   33 Target Full Sequence	2.0	Sequence 5192 from Patent EP2985353	NA	coding protein	psRNATarget
HI407067.1	ncRNA:24   ACAAGGAAGAGACGGCUCACGAUA   1   *|*|=|*|||=||||||||||||| targets:10   AGAUUCGUCUUUGCCGAGUGCUAU   33 Target Full Sequence	2.0	Sequence 5192 from Patent EP2074227	NA	coding protein	psRNATarget
JB167233.1	ncRNA:24   ACAAGGAAGAGACGGCUCACGAUA   1   ||--||||||=||||||||*|||| targets:96   UG--CCUUCUUUGCCGAGUACUAU   117 Target Full Sequence	2.5	Sequence 4897 from Patent EP2559767	NA	coding protein	psRNATarget
HI406772.1	ncRNA:24   ACAAGGAAGAGACGGCUCACGAUA   1   ||--||||||=||||||||*|||| targets:96   UG--CCUUCUUUGCCGAGUACUAU   117 Target Full Sequence	2.5	Sequence 4897 from Patent EP2074227	NA	coding protein	psRNATarget
LQ238902.1	ncRNA:24   ACAAGGAAGAGACGGCUCACGAUA   1   ||--||||||=||||||||*|||| targets:96   UG--CCUUCUUUGCCGAGUACUAU   117 Target Full Sequence	2.5	Sequence 4897 from Patent EP2985353	NA	coding protein	psRNATarget
LQ241915.1	ncRNA:24   ACAAGGAAGAGACGGCUCACGAUA   1   ******||||=||||||||||||* targets:76   GUGAGGUUCUUUGCCGAGUGCUAC   99 Target Full Sequence	3.0	Sequence 7910 from Patent EP2985353	NA	coding protein	psRNATarget
JB170246.1	ncRNA:24   ACAAGGAAGAGACGGCUCACGAUA   1   ******||||=||||||||||||* targets:76   GUGAGGUUCUUUGCCGAGUGCUAC   99 Target Full Sequence	3.0	Sequence 7910 from Patent EP2559767	NA	coding protein	psRNATarget
HI409785.1	ncRNA:24   ACAAGGAAGAGACGGCUCACGAUA   1   ******||||=||||||||||||* targets:76   GUGAGGUUCUUUGCCGAGUGCUAC   99 Target Full Sequence	3.0	Sequence 7910 from Patent EP2074227	NA	coding protein	psRNATarget
HI406639.1	ncRNA:24   ACAAGGAAGAGACGGCUCACGAUA   1   ***|*|||||=||||||||||*|| targets:163   GCGUGCUUCUUUGCCGAGUGCCAU   186 Target Full Sequence	2.5	Sequence 4764 from Patent EP2074227	NA	coding protein	psRNATarget
JB167100.1	ncRNA:24   ACAAGGAAGAGACGGCUCACGAUA   1   ***|*|||||=||||||||||*|| targets:163   GCGUGCUUCUUUGCCGAGUGCCAU   186 Target Full Sequence	2.5	Sequence 4764 from Patent EP2559767	NA	coding protein	psRNATarget
LQ238769.1	ncRNA:24   ACAAGGAAGAGACGGCUCACGAUA   1   ***|*|||||=||||||||||*|| targets:163   GCGUGCUUCUUUGCCGAGUGCCAU   186 Target Full Sequence	2.5	Sequence 4764 from Patent EP2985353	NA	coding protein	psRNATarget
HI406743.1	ncRNA:24   ACAAGGAAGAGACGGCUCACGAUA   1   |****|||||=|*||||||||||| targets:40   UAAAGCUUCUUUACCGAGUGCUAU   63 Target Full Sequence	2.5	Sequence 4868 from Patent EP2074227	NA	coding protein	psRNATarget
JB167204.1	ncRNA:24   ACAAGGAAGAGACGGCUCACGAUA   1   |****|||||=|*||||||||||| targets:40   UAAAGCUUCUUUACCGAGUGCUAU   63 Target Full Sequence	2.5	Sequence 4868 from Patent EP2559767	NA	coding protein	psRNATarget
LQ238873.1	ncRNA:24   ACAAGGAAGAGACGGCUCACGAUA   1   |****|||||=|*||||||||||| targets:40   UAAAGCUUCUUUACCGAGUGCUAU   63 Target Full Sequence	2.5	Sequence 4868 from Patent EP2985353	NA	coding protein	psRNATarget