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BaseInfo

ncRNA ID novel_zma_miR3766
Species Zea mays
Class miRNA
Genome position Chr9:20426-20499 [+]
Reference genome RefGen_v4
Source SRR1583944
Length 24
Mature sequence(if miRNA) 51 - GUGAUGAUGUCUAGUUAUGUAAUU - 74
Stem-loop(if miRNA) --UG        -   U        - ---C   UU   U
    AUGUAAUU GAC AUUAUUAC C    CUU  AUG U
    |||||||| ||| |||||||| |    |||  |||
    UGUAUUGA CUG UAGUAGUG G    GAG  UAU A
UUAA        U   -        U UCAC   UU   U
Stem-loop sequence UGAUGUAAUUGACUAUUAUUACCCCUUUUAUGUUAUUAUUUGAGCACUGUGUGAUGAUGUCUAGUUAUGUAAUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ050603.1
ncRNA:24   UUAAUGUAUUGAUCUGUAGUAGUG   1
  |=||||||||||=|||||||||||
targets:42   AGUUACAUAACUGGACAUCAUCAC   65

1.5 TSA: Zea mays contig51723, mRNA sequence NA coding protein psRNATarget