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BaseInfo

ncRNA ID novel_zma_miR3763
Species Zea mays
Class miRNA
Genome position Chr3:26154808-26154862 [+]
Reference genome RefGen_v4
Source SRR2287031
Length 24
Mature sequence(if miRNA) 1 - GUGUUUUUUCGGACACUCGGCAAA - 24
Stem-loop(if miRNA) --         CG              A
  GUGUUUUUU  GACACUCGGCAAAG A
  |||||||||  |||||||||||||| G
  UACAAAAAA  UUGUGAGUCGUUUC C
UU         --              U
Stem-loop sequence GUGUUUUUUCGGACACUCGGCAAAGAAGCUCUUUGCUGAGUGUUAAAAAACAUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001176732.1
ncRNA:24   AAA--CGGCUCACAGGCUUUUUUGUG   1
  *||--|||||**||||||||||||||
targets:541   CUUAAGCCGAAGGUCCGAAAAAACAC   566

2.0 Zea mays uncharacterized LOC100384153 (LOC100384153), mRNA NA coding protein psRNATarget
BT069313.2
ncRNA:24   AAA--CGGCUCACAGGCUUUUUUGUG   1
  *||--|||||**||||||||||||||
targets:541   CUUAAGCCGAAGGUCCGAAAAAACAC   566

2.0 Zea mays full-length cDNA clone ZM_BFc0069E08 mRNA, complete cds NA coding protein psRNATarget
EU956907.1
ncRNA:24   AAAC--GGCUCACAGGCUUUUUUGUG   1
  *|||--||||**||||||||||||||
targets:425   CUUGAGCCGAAGGUCCGAAAAAACAC   450

2.0 Zea mays clone 1577103 mRNA sequence NA coding protein psRNATarget