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BaseInfo

ncRNA ID novel_zma_miR3752
Species Zea mays
Class miRNA
Genome position Chr10:81059596-81059717 [+]
Reference genome RefGen_v4
Source SRR1583944;SRR2647388
Length 24
Mature sequence(if miRNA) 1 - AAAGUGUGCUUCUUUGCCGAGUGC - 24
Stem-loop(if miRNA) --    -U      CUU         C   A     UA      A         UAU   AGU
  AAAG  GUGCUU   UGCCGAGUG CAG GCCAU  CACUCG CAAAGAACC   ACC   G
  ||||  ||||||   ||||||||| ||| |||||  |||||| |||||||||   |||
  UUUC  CACGAA   ACGGCUCAC GUC CGGUA  GUGAGC GUUUCUUGG   UGG   C
CA    UC      ---         A   C     UC      C         UUC   ACC
Stem-loop sequence AAAGUGUGCUUCUUUGCCGAGUGCCAGAGCCAUUACACUCGACAAAGAACCUAUACCAGUGCCCAGGUCUUGGUUCUUUGCCGAGUGCUAUGGCCCUGACACUCGGCAAAGCACCUCUUUAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JB167423.1
ncRNA:24   CGUGAGCCGUUUCUUCGUGUGAAA   1
  |||||||||||||||||||=||||
targets:208   GCACUCGGCAAAGAAGCACGCUUU   231

1.5 Sequence 5087 from Patent EP2559767 NA coding protein psRNATarget
LQ239092.1
ncRNA:24   CGUGAGCCGUUUCUUCGUGUGAAA   1
  |||||||||||||||||||=||||
targets:208   GCACUCGGCAAAGAAGCACGCUUU   231

1.5 Sequence 5087 from Patent EP2985353 NA coding protein psRNATarget
HI406962.1
ncRNA:24   CGUGAGCCGUUUCUUCGUGUGAAA   1
  |||||||||||||||||||=||||
targets:208   GCACUCGGCAAAGAAGCACGCUUU   231

1.5 Sequence 5087 from Patent EP2074227 NA coding protein psRNATarget