ncRNA ID | novel_zma_miR3748 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr2:105855173-105855301 [+] |
Reference genome | RefGen_v4 |
Source | SRR2287031 |
Length | 24 |
Mature sequence(if miRNA) | 1 - GACCUUGUUCGGUUGCGUCUGGAU - 24 |
Stem-loop(if miRNA) |
--GAC                      AAA     --U  AG           C   UU   U  A      CUUGUUCGGUUGCGUCUGGAUC   AGAGA   UG  GGGGAUUAAAU CCU  CUA UC A      ||||||||||||||||||||||   |||||   ||  ||||||||||| |||  ||| || U      GAACAAGCCAAUGCAGACCUAG   UCUUU   AC  CCCCUAAUUUA GGA  GAU AG U AUCCC                      --C     UUU  CU           U   GG   C  U |
Stem-loop sequence | GACCUUGUUCGGUUGCGUCUGGAUCAAAAGAGAUUGAGGGGGAUUAAAUCCCUUUCUAUUCAAUUUGACUAGGGAGGUAUUUAAUCCCCUCCAUUUUUUCUCGAUCCAGACGUAACCGAACAAGCCCUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AY110278.1 |
|
1.5 | Zea mays CL14707_1 mRNA sequence | NA | coding protein | psRNATarget |