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BaseInfo

ncRNA ID novel_zma_miR3742
Species Zea mays
Class miRNA
Genome position Chr2:68681008-68681098 [+]
Reference genome RefGen_v4
Source SRR2287031
Length 24
Mature sequence(if miRNA) 1 - UUUAUAACAAAUCGUAGGAAAUAA - 24
Stem-loop(if miRNA) --       C   U        AUAAAUAA  UACGAGAGGCAACUGG
  UUUAUAA AAA CGUAGGAA        CU                U
  ||||||| ||| ||||||||        ||                A
  AAAUAUU UUU GCAUCCUU        AU                G
GA       U   U        ------CA  ACAAAUAAAGGAUCUC
Stem-loop sequence UUUAUAACAAAUCGUAGGAAAUAAAUAACUUACGAGAGGCAACUGGUAGCUCUAGGAAAUAAACAUAACUUCCUACGUUUUUUUAUAAAAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU949881.1
ncRNA:24   AAUAAAGGAUGCUAAACAAUAUUU   1
  ||||||||||||=|||||||||||
targets:1209   UUAUUUCCUACGGUUUGUUAUAAA   1232

1.5 Zea mays clone 450754 mRNA sequence NA coding protein psRNATarget