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BaseInfo

ncRNA ID novel_zma_miR3736
Species Zea mays
Class miRNA
Genome position Chr2:16662217-16662360 [-]
Reference genome RefGen_v4
Source SRR2287031;SRR2287159;SRR2287162;SRR2287163
Length 24
Mature sequence(if miRNA) 121 - GGUGCUCUCUGGCCAGGCGCGGAC - 144
Stem-loop(if miRNA) --  U    U   -      -     ACGAUCCGCGGCACAGAGCCGGACGGUCCGCGACCUGGCAUGAGGCGG
  GG GCUC CUG GCCAGG CGCGG                                                A
  || |||| ||| |||||| |||||
  CC CGAG GAC UGGUCC GUGUC                                                G
GG  -    -   A      A     UGGCAGACCGGGACACGGCGCCUGGCAGGCGCGGACUGGUCUCUCGUG
Stem-loop sequence GGUGCUCUCUGGCCAGGCGCGGACGAUCCGCGGCACAGAGCCGGACGGUCCGCGACCUGGCAUGAGGCGGAGGUGCUCUCUGGUCAGGCGCGGACGGUCCGCGGCACAGGGCCAGACGGUCUGUGACCUGGUACAGGAGCCCGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ096610.1
ncRNA:24   CAGGCGCGGACCGGUCUCUCGUGG   1
  |||||||=|||*||||||||||||
targets:29   GUCCGCGUCUGACCAGAGAGCACC   52

2.5 TSA: Zea mays contig32265, mRNA sequence NA coding protein psRNATarget