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BaseInfo

ncRNA ID novel_zma_miR3732
Species Zea mays
Class miRNA
Genome position Chr2:46187227-46187278 [-]
Reference genome RefGen_v4
Source SRR2287031;SRR2287160;SRR2287162;SRR2287163
Length 24
Mature sequence(if miRNA) 1 - GUCCACGGUCCGGACUGUCCGCGG - 24
Stem-loop(if miRNA) --             -  UC A    A
  GCGGACAGUCCGG CC  G GGCC G
  ||||||||||||| ||  | ||||
  CGCCUGUCAGGCC GG  C CUGG A
GG             U  CA -    C
Stem-loop sequence GCGGACAGUCCGGCCUCGAGGCCAGACGGUCCACGGUCCGGACUGUCCGCGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ059430.1
ncRNA:24   GGCGCCUGUCAGGCCUGGCACCUG   1
  *|||||||*||||||||||*||||
targets:47   GCGCGGACCGUCCGGACCGCGGAC   70

2.5 TSA: Zea mays contig60552, mRNA sequence NA coding protein psRNATarget
EU940813.1
ncRNA:24   GGCGCCUGUCAGGCCUGGCACCUG   1
  *|||||||*||||||||||*||||
targets:60   GCGCGGACCGUCCGGACCGCGGAC   83

2.5 Zea mays clone 1145688 mRNA sequence NA coding protein psRNATarget