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BaseInfo

ncRNA ID	novel_zma_miR3729
Species	Zea mays
Class	miRNA
Genome position	Chr2:97615749-97615803 [-]
Reference genome	RefGen_v4
Source	SRR2287031;SRR2287159;SRR2287160;SRR2287161;SRR2287162;SRR2287163;SRR2287164;SRR2287165;SRR5451003;SRR5451004;SRR1997866;SRR5451005;SRR5451006;SRR2089698;SRR2089699;SRR2089700;SRR2089701;SRR2089702;SRR2089703;SRR2089704;SRR2089705
Length	24
Mature sequence(if miRNA)	1 - ACAAAGGAACUAGAACGGAAUGGC - 24
Stem-loop(if miRNA)	--        C C     UG    UGU   CGUUCUGU C AGUUU  UUGU   U   |||||||| | |||||  ||||   U   GUAAGGCA G UCAAG  AACA   G CG        A A     GA    UUG
Stem-loop sequence	CGUUCUGUCCCAGUUUUGUUGUUGUUUGGUUACAAAGGAACUAGAACGGAAUGGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020546669.1	ncRNA:24   CGGUAAGGCAAGAUCAAGGAAACA   1   |=||||=||||||||||||||||| targets:30   GUCAUUUCGUUCUAGUUCCUUUGU   53 Target Full Sequence	1.0	PREDICTED: Zea mays hypothetical protein (LOC103643194), transcript variant X1, mRNA	NA	coding protein	psRNATarget
JB170147.1	ncRNA:24   CGGUAAGGCAAGAUCAAGGAAACA   1   ||||*||||||||||||*|||||| targets:110   GCCACUCCGUUCUAGUUACUUUGU   133 Target Full Sequence	1.5	Sequence 7811 from Patent EP2559767	NA	coding protein	psRNATarget
LQ241816.1	ncRNA:24   CGGUAAGGCAAGAUCAAGGAAACA   1   ||||*||||||||||||*|||||| targets:110   GCCACUCCGUUCUAGUUACUUUGU   133 Target Full Sequence	1.5	Sequence 7811 from Patent EP2985353	NA	coding protein	psRNATarget
HI409686.1	ncRNA:24   CGGUAAGGCAAGAUCAAGGAAACA   1   ||||*||||||||||||*|||||| targets:110   GCCACUCCGUUCUAGUUACUUUGU   133 Target Full Sequence	1.5	Sequence 7811 from Patent EP2074227	NA	coding protein	psRNATarget
XM_020542825.1	ncRNA:24   CGGUAAGGCAAGAUCAAGGAAACA   1   |=||*|=||||||||||*|||||| targets:707   GUCACUUCGUUCUAGUUACUUUGU   730 Target Full Sequence	2.5	PREDICTED: Zea mays UPF0051 protein ABCI8, chloroplastic-like (LOC109941650), mRNA	NA	coding protein	psRNATarget