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BaseInfo

ncRNA ID	novel_zma_miR3725
Species	Zea mays
Class	miRNA
Genome position	Chr2:144172457-144172595 [-]
Reference genome	RefGen_v4
Source	SRR2287031
Length	24
Mature sequence(if miRNA)	116 - AGCCCUUAGGGUUGAUUUGGUGAC - 139
Stem-loop(if miRNA)	--AGCC  U                              -A           U     GG  GA AAA GG       CU AGGGUUGAUUUGGUGACAAGGGGGUCACGG  GGAUUGGAGGG AUUGA  GG  C   G  A       || ||||||||||||||||||||||||||||||  ||||||||||| |||||  ||  |   |       GA UCCCAACUAAACCACUGUUCUCCUAGUGUC  CCUAACCUCCC UAACU  CC  G   C  U GAUCCA  U                              CC           C     -A  GG -GG AC
Stem-loop sequence	AGCCCUUAGGGUUGAUUUGGUGACAAGGGGGUCACGGAGGAUUGGAGGGUAUUGAGGGGGACAAAGGGAUCACGGGGGCCAUCAAUCCCCUCCAAUCCCCCUGUGAUCCUCUUGUCACCAAAUCAACCCUUAGACCUAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008677028.2	ncRNA:24   CAGUGGUUUAGUUGGGAUUCCCGA   1   ||=*=||||*||||=||||||||| targets:2409   GUUCUCAAACCAACUCUAAGGGCU   2432 Target Full Sequence	2.5	PREDICTED: Zea mays SCP1-like small phosphatase 4b (LOC103651391), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020550525.1	ncRNA:24   CAGUGGUUUAGUUGGGAUUCCCGA   1   ||=*=||||*||||=||||||||| targets:2427   GUUCUCAAACCAACUCUAAGGGCU   2450 Target Full Sequence	2.5	PREDICTED: Zea mays SCP1-like small phosphatase 4b (LOC103651391), transcript variant X1, mRNA	NA	coding protein	psRNATarget