ncRNA ID | novel_zma_miR3722 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr9:30492432-30492512 [+] |
Reference genome | RefGen_v4 |
Source | SRR1583944 |
Length | 24 |
Mature sequence(if miRNA) | 58 - UAUAUUUGGCAAUUUAAGAACUAA - 81 |
Stem-loop(if miRNA) |
--   -  C      AG       U    C       U  A   AGU CU UAAAUU  UAAAUAU GGAA UAAAAUA AG U   ||| || ||||||  ||||||| |||| ||||||| || A   UCA GA AUUUAA  GUUUAUA CUUU AUUUUAU UC A AA   A  -      CG       U    A       C  U |
Stem-loop sequence | AGUCUCUAAAUUAGUAAAUAUUGGAACUAAAAUAUAGAUAAUCUCUAUUUUAAUUUCUAUAUUUGGCAAUUUAAGAACUAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EU956677.1 |
|
2.0 | Zea mays clone 1570443 hypothetical protein mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
XM_020545045.1 |
|
3.0 | PREDICTED: Zea mays CAB2 (LOC100281582), transcript variant X2, mRNA | NA | coding protein | psRNATarget |