Search result

BaseInfo

ncRNA ID novel_zma_miR3719
Species Zea mays
Class miRNA
Genome position Chr2:213096483-213096544 [-]
Reference genome RefGen_v4
Source SRR2287031;SRR2287160;SRR2287161;SRR2287163;SRR2089702;SRR2089705
Length 24
Mature sequence(if miRNA) 1 - AAAUCAUGGAUUUGUAGUGGCGGU - 24
Stem-loop(if miRNA) --              AUG        AAAC
  CGCCACUACAAAUC   GAUUUGUA    C
  ||||||||||||||   ||||||||
  GCGGUGAUGUUUAG   CUAAACAU    G
UG              GUA        CACC
Stem-loop sequence CGCCACUACAAAUCAUGGAUUUGUAAAACCGCCACUACAAAUCAUGGAUUUGUAGUGGCGGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU943186.1
ncRNA:24   UGGCGGUGAUGUUUAGGUACUAAA   1
  ||||=|||*|*|||||||||||||
targets:1949   ACCGUCACAAGAAAUCCAUGAUUU   1972

2.0 Zea mays clone 1582065 mRNA sequence NA coding protein psRNATarget
JB163447.1
ncRNA:24   UGGCGGUGAUGUUUAGGUACUAAA   1
  ||||=|**||*|||||||||||||
targets:62   ACCGUCUGUAGAAAUCCAUGAUUU   85

3.0 Sequence 1111 from Patent EP2559767 NA coding protein psRNATarget
HI402986.1
ncRNA:24   UGGCGGUGAUGUUUAGGUACUAAA   1
  ||||=|**||*|||||||||||||
targets:62   ACCGUCUGUAGAAAUCCAUGAUUU   85

3.0 Sequence 1111 from Patent EP2074227 NA coding protein psRNATarget
LQ235116.1
ncRNA:24   UGGCGGUGAUGUUUAGGUACUAAA   1
  ||||=|**||*|||||||||||||
targets:62   ACCGUCUGUAGAAAUCCAUGAUUU   85

3.0 Sequence 1111 from Patent EP2985353 NA coding protein psRNATarget