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BaseInfo

ncRNA ID novel_zma_miR3693
Species Zea mays
Class miRNA
Genome position Chr1:66329115-66329214 [+]
Reference genome RefGen_v4
Source SRR2287031;SRR2287159;SRR2287162;SRR2287163
Length 21
Mature sequence(if miRNA) 1 - UCACUGUUUGCUGAUGACGUG - 21
Stem-loop(if miRNA) --                      C                 -      A
  UCACUGUUUGCUGAUGACGUGG CGUCUUUGUUUUUUUUU GAAGUA C
  |||||||||||||||||||||| ||||||||||||||||| |||||| A
  AGUGACAAACGACUACUGCACC GCAGAAACAAAAAAAAA CUUCAU U
AA                      A                 A      U
Stem-loop sequence UCACUGUUUGCUGAUGACGUGGCCGUCUUUGUUUUUUUUUGAAGUAACAUUUACUUCAAAAAAAAAACAAAGACGACCACGUCAUCAGCAAACAGUGAAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008646986.2
ncRNA:21   GUGCAGUAGUCGUUUGUCACU   1
  *|*|||*||||||||||||||
targets:12432   AAAGUCCUCAGCAAACAGUGA   12452

2.0 PREDICTED: Zea mays microtubule-associated protein futsch (LOC103626570), mRNA NA coding protein psRNATarget