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BaseInfo

ncRNA ID novel_zma_miR3681
Species Zea mays
Class miRNA
Genome position Chr1:66329110-66329209 [-]
Reference genome RefGen_v4
Source SRR2287031;SRR2287162
Length 21
Mature sequence(if miRNA) 80 - UCACUGUUUGCUGAUGACGUG - 100
Stem-loop(if miRNA) --                                        U      A
  UCACUGUUUGCUGAUGACGUGGUCGUCUUUGUUUUUUUUU GAAGUA A
  |||||||||||||||||||||||||||||||||||||||| |||||| U
  AGUGACAAACGACUACUGCACCGGCAGAAACAAAAAAAAA CUUCAU G
AA                                        -      U
Stem-loop sequence UCACUGUUUGCUGAUGACGUGGUCGUCUUUGUUUUUUUUUUGAAGUAAAUGUUACUUCAAAAAAAAACAAAGACGGCCACGUCAUCAGCAAACAGUGAAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008646986.2
ncRNA:21   GUGCAGUAGUCGUUUGUCACU   1
  *|*|||*||||||||||||||
targets:12432   AAAGUCCUCAGCAAACAGUGA   12452

2.0 PREDICTED: Zea mays microtubule-associated protein futsch (LOC103626570), mRNA NA coding protein psRNATarget