ncRNA ID | osa-miR166l-5p |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr9:16951817-16951933 [+] |
Reference genome | MSU7 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 13 - GGAUUGUUGUCUGGUUCAAGG - 33 |
Stem-loop(if miRNA) |
- A UU A U -- -- -AAA UU GUU GGUUAAGGGGAUUG GUCUGGUUC AGGUC CCA CAU UGUGC AUG C ||| |||||||||||||| ||||||||| ||||| ||| ||| ||||| ||| CGA CCAAUUUCCCUAAC CGGACCAGG UCUAG GGU GUA ACACG UAC A A - UU C U UC GG GAGG UU |
Stem-loop sequence | GUUAGGUUAAGGGGAUUGUUGUCUGGUUCAAGGUCUCCACAUUGUGCAAAAUGUUCAUUCAUGGAGGCACAGGAUGCUUGGUGAUCUCGGACCAGGCUUCAAUCCCUUUAACCAGCA |
1 | PMID:15200956
"Computational identification of plant microRNAs and their targets, including a stress-induced miRNA"; Jones-Rhoades MW, Bartel DP; Mol Cell. 14:787-799(2004). |
2 | PMID:21901091
"Viral infection induces expression of novel phased microRNAs from conserved cellular microRNA precursors"; Du P, Wu J, Zhang J, Zhao S, Zheng H, Gao G, Wei L, Li Y; PLoS Pathog. 7:e1002176(2011). |