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BaseInfo

ncRNA ID novel_zma_miR3678
Species Zea mays
Class miRNA
Genome position Chr9:31683193-31683401 [-]
Reference genome RefGen_v4
Source SRR1583944
Length 24
Mature sequence(if miRNA) 1 - ACUCUAUAUAUGAUAUCAUGACAC - 24
Stem-loop(if miRNA) --                 C   G               U           GA                    G  C                   -     - U
  GUCAUGAUAUCAUAUAU GAG UUGUGAUAAAAAUUU AGAAAGUUUCG  AAAGCUGUGACGCACUAUGU UA AAACCUAAGAGAUCCACAU UGAAA C C
  ||||||||||||||||| ||| ||||||||||||||| |||||||||||  |||||||||||||||||||| || ||||||||||||||||||| ||||| | U
  CAGUACUAUAGUAUAUA CUC GACACUAUUUUUAAA UCUUUUAAAGC  UUUCGACACUGCGUGAUACA AU UUUGGAUUCUCUAGGUGUG ACUUU G A
CA                 U   A               C           UC                    A  C                   U     A U
Stem-loop sequence GUCAUGAUAUCAUAUAUCGAGGUUGUGAUAAAAAUUUUAGAAAGUUUCGGAAAAGCUGUGACGCACUAUGUGUACAAACCUAAGAGAUCCACAUUGAAACUCUAUGAUUUCAUGUGUGGAUCUCUUAGGUUUCUAAACAUAGUGCGUCACAGCUUUCUCGAAAUUUUCUCAAAUUUUUAUCACAGACUCUAUAUAUGAUAUCAUGACAC