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BaseInfo

ncRNA ID novel_zma_miR3676
Species Zea mays
Class miRNA
Genome position Chr1:114053947-114054029 [-]
Reference genome RefGen_v4
Source SRR2287031;SRR4237221;SRR4237222;SRR4237225
Length 21
Mature sequence(if miRNA) 63 - UGAGAGAAUGGUAUAAUCACA - 83
Stem-loop(if miRNA) --        U                 C   -      AUU
  UGAGAGAA GGUAUAAUCACAAUUAA GCU GAAAAU   G
  |||||||| ||||||||||||||||| ||| ||||||   U
  ACUCUCUU UCAUAUUAGUGUUAAUU UGA CUUUUA   U
AC        C                 -   A      AAG
Stem-loop sequence UGAGAGAAUGGUAUAAUCACAAUUAACGCUGAAAAUAUUGUUGAAAUUUUCAAGUUUAAUUGUGAUUAUACUCUUCUCUCACA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020549631.1
ncRNA:21   ACACUAAUAUGGUAAGAGAGU   1
  **||||*||||||||*|||||
targets:1045   CCUGAUGAUACCAUUGUCUCA   1065

2.5 PREDICTED: Zea mays uncharacterized LOC100277245 (LOC100277245), transcript variant X1, mRNA NA coding protein psRNATarget