ncRNA ID | novel_zma_miR3674 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr1:148361091-148361205 [-] |
Reference genome | RefGen_v4 |
Source | SRR2287031;SRR2287165 |
Length | 24 |
Mature sequence(if miRNA) | 1 - CCUUCUUUUUGUGAGGGGCUGUAA - 24 |
Stem-loop(if miRNA) |
--                    A    U U           -GU    -----   G   U   GCAGCCCCUCACAAAAAGGA GAUA G CCCACCUGCAG   CGAC     CAG UAA G   |||||||||||||||||||| |||| | |||||||||||   ||||     ||| |||   UGUCGGGGAGUGUUUUUCUU CUAU C GGGUGGGCGUC   GUUG     GUU AUU U AA                    C    - U           GUC    UUGUU   G   U |
Stem-loop sequence | GCAGCCCCUCACAAAAAGGAAGAUAUGUCCCACCUGCAGGUCGACCAGGUAAUGUUUUAGUUGUUGUUGUUGCUGCUGCGGGUGGGUCUAUCCUUCUUUUUGUGAGGGGCUGUAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
X55314.1 |
|
1.5 | Zea mays A2 gene | NA | coding protein | psRNATarget | |||||||||
JB170491.1 |
|
2.0 | Sequence 8155 from Patent EP2559767 | NA | coding protein | psRNATarget | |||||||||
LQ242160.1 |
|
2.0 | Sequence 8155 from Patent EP2985353 | NA | coding protein | psRNATarget | |||||||||
HI410030.1 |
|
2.0 | Sequence 8155 from Patent EP2074227 | NA | coding protein | psRNATarget |