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BaseInfo

ncRNA ID novel_zma_miR3672
Species Zea mays
Class miRNA
Genome position Chr1:180350185-180350252 [-]
Reference genome RefGen_v4
Source SRR2287031
Length 24
Mature sequence(if miRNA) 1 - AACUUAUUGUUGGUCGCUAUAGAU - 24
Stem-loop(if miRNA) --       A  G U        C C    AG C
  UUGUAGC AC G CGGUGGGU G UAAA  U U
  ||||||| || | |||||||| | ||||  |
  GAUAUCG UG U GUUAUUCA C AUUU  A A
UA       C  G U        A A    AA G
Stem-loop sequence UUGUAGCAACGGUCGGUGGGUCGCUAAAAGUCUAGAAAUUUAACAACUUAUUGUUGGUCGCUAUAGAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
HI409716.1
ncRNA:24   UAGAUAUCGCUGGUUGUUAUUCAA   1
  ||||||||||||||||*|||||||
targets:19   AUCUAUAGCGACCAACCAUAAGUU   42

1.5 Sequence 7841 from Patent EP2074227 NA coding protein psRNATarget
JB170177.1
ncRNA:24   UAGAUAUCGCUGGUUGUUAUUCAA   1
  ||||||||||||||||*|||||||
targets:19   AUCUAUAGCGACCAACCAUAAGUU   42

1.5 Sequence 7841 from Patent EP2559767 NA coding protein psRNATarget
LQ241846.1
ncRNA:24   UAGAUAUCGCUGGUUGUUAUUCAA   1
  ||||||||||||||||*|||||||
targets:19   AUCUAUAGCGACCAACCAUAAGUU   42

1.5 Sequence 7841 from Patent EP2985353 NA coding protein psRNATarget