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BaseInfo

ncRNA ID	novel_zma_miR3671
Species	Zea mays
Class	miRNA
Genome position	Chr1:180447231-180447288 [-]
Reference genome	RefGen_v4
Source	SRR2287031;SRR2287159;SRR2287162
Length	25
Mature sequence(if miRNA)	1 - GCAUGGACUGCGGAUCGAUGGAUGC - 25
Stem-loop(if miRNA)	--    -      UCA    AC      AUC   AUCC UCGGUU   GCAG  CCAUGC   A   |||| ||||||   ||||  ||||||   UAGG AGCUAG   CGUC  GGUACG   A CG    U      --G    -A      ACA
Stem-loop sequence	AUCCUCGGUUUCAGCAGACCCAUGCAUCAAACAGCAUGGACUGCGGAUCGAUGGAUGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
HI409071.1	ncRNA:25   CGUAGGUAGCUAGGCGUCAGGUACG   1   ||||||||||||||||||||||||| targets:7   GCAUCCAUCGAUCCGCAGUCCAUGC   31 Target Full Sequence	0.0	Sequence 7196 from Patent EP2074227	NA	coding protein	psRNATarget
LQ241201.1	ncRNA:25   CGUAGGUAGCUAGGCGUCAGGUACG   1   ||||||||||||||||||||||||| targets:7   GCAUCCAUCGAUCCGCAGUCCAUGC   31 Target Full Sequence	0.0	Sequence 7196 from Patent EP2985353	NA	coding protein	psRNATarget
JB169532.1	ncRNA:25   CGUAGGUAGCUAGGCGUCAGGUACG   1   ||||||||||||||||||||||||| targets:7   GCAUCCAUCGAUCCGCAGUCCAUGC   31 Target Full Sequence	0.0	Sequence 7196 from Patent EP2559767	NA	coding protein	psRNATarget
EZ091534.1	ncRNA:25   CGUAGGUAGCUAGGCGUCAGGUACG   1   ||||||||||||||||||||||||| targets:47   GCAUCCAUCGAUCCGCAGUCCAUGC   71 Target Full Sequence	0.0	TSA: Zea mays contig27183, mRNA sequence	NA	coding protein	psRNATarget
JB166918.1	ncRNA:25   CGUAGGUAGCUAGGCGUCAGGUACG   1   ||||||||||||||*|||||||||| targets:8   GCAUCCAUCGAUCCACAGUCCAUGC   32 Target Full Sequence	1.5	Sequence 4582 from Patent EP2559767	NA	coding protein	psRNATarget
HI406457.1	ncRNA:25   CGUAGGUAGCUAGGCGUCAGGUACG   1   ||||||||||||||*|||||||||| targets:8   GCAUCCAUCGAUCCACAGUCCAUGC   32 Target Full Sequence	1.5	Sequence 4582 from Patent EP2074227	NA	coding protein	psRNATarget
LQ238791.1	ncRNA:25   CGUAGGUAGCUAGGCGUCAGGUACG   1   ||||||||||||||*|||||||||| targets:8   GCAUCCAUCGAUCCACAGUCCAUGC   32 Target Full Sequence	1.5	Sequence 4786 from Patent EP2985353	NA	coding protein	psRNATarget
JB167122.1	ncRNA:25   CGUAGGUAGCUAGGCGUCAGGUACG   1   ||||||||||||||*|||||||||| targets:8   GCAUCCAUCGAUCCACAGUCCAUGC   32 Target Full Sequence	1.5	Sequence 4786 from Patent EP2559767	NA	coding protein	psRNATarget
LQ238587.1	ncRNA:25   CGUAGGUAGCUAGGCGUCAGGUACG   1   ||||||||||||||*|||||||||| targets:8   GCAUCCAUCGAUCCACAGUCCAUGC   32 Target Full Sequence	1.5	Sequence 4582 from Patent EP2985353	NA	coding protein	psRNATarget
HI406661.1	ncRNA:25   CGUAGGUAGCUAGGCGUCAGGUACG   1   ||||||||||||||*|||||||||| targets:8   GCAUCCAUCGAUCCACAGUCCAUGC   32 Target Full Sequence	1.5	Sequence 4786 from Patent EP2074227	NA	coding protein	psRNATarget
BT038487.1	ncRNA:25   CGUAGGUAGCUAGGCGUCAGGUACG   1   |||**|=||||||=||||||||||| targets:1335   GCACGCGUCGAUCUGCAGUCCAUGC   1359 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0279N24 mRNA, complete cds	NA	coding protein	psRNATarget
EZ104109.1	ncRNA:19   UAGCUAGGCGUCAGGUACG   1   ||||||||||||||||||| targets:1   AUCGAUCCGCAGUCCAUGC   19 Target Full Sequence	0.0	TSA: Zea mays contig39766, mRNA sequence	NA	coding protein	psRNATarget