ncRNA ID | novel_zma_miR3669 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr1:185832875-185833010 [-] |
Reference genome | RefGen_v4 |
Source | SRR2287031;SRR2287164 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUGGUUUAUAUGGUUGAGGGCGCA - 24 |
Stem-loop(if miRNA) |
--CA                                                               U     CCCUCAACCAUAUAAACCAUGCUUUUCCACUCUCACCAGACAAUGUGAGACUAUUCCCAACAA U     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     GGGAGUUGGUAUAUUUGGUACGAAAAGGUGAGAGUGGUCUGUUACACUCUGAUAAGGGUUGUU A ACGC                                                               A |
Stem-loop sequence | CACCCUCAACCAUAUAAACCAUGCUUUUCCACUCUCACCAGACAAUGUGAGACUAUUCCCAACAAUUAAUUGUUGGGAAUAGUCUCACAUUGUCUGGUGAGAGUGGAAAAGCAUGGUUUAUAUGGUUGAGGGCGCA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EZ057835.1 |
|
1.5 | TSA: Zea mays contig58957, mRNA sequence | NA | coding protein | psRNATarget | |||||||||
EU977016.1 |
|
1.5 | Zea mays clone 996415 hypothetical protein mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
EU977016.1 |
|
1.5 | Zea mays clone 996415 hypothetical protein mRNA, complete cds | NA | coding protein | psRNATarget |