ncRNA ID | novel_zma_miR3665 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr10:104481112-104481231 [-] |
Reference genome | RefGen_v4 |
Source | SRR2287031;SRR2287159;SRR1997865 |
Length | 24 |
Mature sequence(if miRNA) | 1 - GAAAAUAUGCUAUUUUCGUCGGUU - 24 |
Stem-loop(if miRNA) |
--             G   -       C    --             G    UAUUUUCGUC   CCGACGAAAAUAG UAU UUUUCGU GGUA  CCGACGGAAAUAG UGCC          G   ||||||||||||| ||| ||||||| ||||  ||||||||||||| ||||   GGCUGCUUUUAUC GUA AAAAGCG CCGU  GGCUGCUUUUAUC GCGG          A UU             -   U       A    CC             G    CUUUUAUUCA |
Stem-loop sequence | CCGACGAAAAUAGGUAUUUUUCGUCGGUACCGACGGAAAUAGGUGCCUAUUUUCGUCGAACUUAUUUUCGGCGGCUAUUUUCGUCGGCCUGCCAGCGAAAAUAUGCUAUUUUCGUCGGUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_008652081.2 |
|
1.0 | PREDICTED: Zea mays ADP-ribosylation factor GTPase-activating protein AGD7 (LOC103631077), mRNA | NA | coding protein | psRNATarget |