ncRNA ID | novel_zma_miR3664 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr1:230713642-230713751 [-] |
Reference genome | RefGen_v4 |
Source | SRR2287031 |
Length | 24 |
Mature sequence(if miRNA) | 87 - AAUUGAAUAAGGAGAGGAUUUUAG - 110 |
Stem-loop(if miRNA) |
--AA              G       C C  CA      C       C      U     UUGAAUAAGGAGAG AUUUUAG C CU  AAUCCC UCCGGUU UGUGGC G     |||||||||||||| ||||||| | ||  |||||| ||||||| |||||| G     AAUUUAUUCUUCUU UAAAAUC G GA  UUAGGG AGGCUAA ACACUG C UUAA              G       A U  AG      -       A      A |
Stem-loop sequence | AAUUGAAUAAGGAGAGGAUUUUAGCCCCUCAAAUCCCCUCCGGUUCUGUGGCUGGCAGUCACAAAAUCGGAGGGAUUGAAGUGACUAAAAUGUUCUUCUUAUUUAAAAUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_008662350.2 |
|
2.5 | PREDICTED: Zea mays paramyosin (LOC103639615), transcript variant X2, mRNA | NA | coding protein | psRNATarget | |||||||||
XM_008664337.2 |
|
2.5 | PREDICTED: Zea mays ABC transporter F family member 1 (LOC103640881), mRNA | NA | coding protein | psRNATarget |