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BaseInfo

ncRNA ID novel_zma_miR3660
Species Zea mays
Class miRNA
Genome position Chr1:266445540-266445643 [-]
Reference genome RefGen_v4
Source SRR2287031;SRR2287162;SRR2287165
Length 24
Mature sequence(if miRNA) 81 - AAUAGGAUGUUUCCACUGACGGUU - 104
Stem-loop(if miRNA) --                  A         UAAGA                U
  AAUAGGAUGUUUCCACUG CGGUUGUGU     UAACCGCCAGUGGAAA C
  |||||||||||||||||| |||||||||     ||||||||||||||||
  UUAUCCUACAAAGGUGAC GCCAACACA     GUUGGCGGUCACUUUU A
CU                  C         UUGUG                A
Stem-loop sequence AAUAGGAUGUUUCCACUGACGGUUGUGUUAAGAUAACCGCCAGUGGAAAUCAAUUUUCACUGGCGGUUGGUGUUACACAACCGCCAGUGGAAACAUCCUAUUUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ101180.1
ncRNA:24   UUGGCAGUCACCUUUGUAGGAUAA   1
  |||||*|||||||||=||||||||
targets:81   AACCGCCAGUGGAAAUAUCCUAUU   104

2.5 TSA: Zea mays contig36836, mRNA sequence NA coding protein psRNATarget