ncRNA ID | osa-miR1878 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr9:16555509-16555608 [+] |
Reference genome | MSU7 |
Source | miRBase |
Length | 24 |
Mature sequence(if miRNA) | 11 - ACUUAAUCUGGACACUAUAAAAGA - 34 |
Stem-loop(if miRNA) |
--    CUG -                       AGAAAAU  U      G   ACCA   C AGACUUAAUCUGGACACUAUAAA       UG GCAUGU A   ||||   | |||||||||||||||||||||||       || ||||||   UGGU   G UUUGAGUUAGACUUGUGAUGUUU       AC CGUAUA A GU    -AA A                       AAAUAUU  C      A |
Stem-loop sequence | ACCACUGCAGACUUAAUCUGGACACUAUAAAAGAAAAUUGUGCAUGUGAAAAUAUGCCCAUUAUAAAUUUGUAGUGUUCAGAUUGAGUUUAGAAUGGUUG |
1 | PMID:18687877
"A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains"; Zhu QH, Spriggs A, Matthew L, Fan L, Kennedy G, Gubler F, Helliwell C; Genome Res. 18:1456-1465(2008). |