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BaseInfo

ncRNA ID	novel_zma_miR3650
Species	Zea mays
Class	miRNA
Genome position	Chr1:247133520-247133583 [+]
Reference genome	RefGen_v4
Source	SRR2287031;SRR2287162;SRR2287163;SRR2287164;SRR2287165
Length	24
Mature sequence(if miRNA)	41 - AGCGACCAACCGUAGAUCGCUGAA - 64
Stem-loop(if miRNA)	--   A    A     GA       UA    AA   UAG GAUU AUGGU  GUCGCUA  GAGC  G   ||| |||| |||||  |||||||  ||||   GUC CUAG UGCCA  CAGCGAU  UUUG  G AA   G    A     AC       --    CU
Stem-loop sequence	UAGAGAUUAAUGGUGAGUCGCUAUAGAGCAAGGUCGUUUUAGCGACCAACCGUAGAUCGCUGAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_001177172.1	ncRNA:24   AAGUCGCUAGAUGCCAACCAGCGA   1   ||||||||*||||||||||||||| targets:1107   UUCAGCGACCUACGGUUGGUCGCU   1130 Target Full Sequence	1.0	Zea mays uncharacterized LOC100384696 (LOC100384696), mRNA	NA	coding protein	psRNATarget
NM_001177172.1	ncRNA:24   AA-GUCGCUAGAUGCCAACCAGCGA   1   ||-||||||*|||||||||||=||| targets:1073   UUACAGCGACCUACGGUUGGUUGCU   1097 Target Full Sequence	2.5	Zea mays uncharacterized LOC100384696 (LOC100384696), mRNA	NA	coding protein	psRNATarget
BT083982.1	ncRNA:24   AAGUCGCUAGAUGCCAACCAGCGA   1   ||||||||*||||||||||||||| targets:1107   UUCAGCGACCUACGGUUGGUCGCU   1130 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFb0061H19 mRNA, complete cds	NA	coding protein	psRNATarget
BT083982.1	ncRNA:24   AA-GUCGCUAGAUGCCAACCAGCGA   1   ||-||||||*|||||||||||=||| targets:1073   UUACAGCGACCUACGGUUGGUUGCU   1097 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0061H19 mRNA, complete cds	NA	coding protein	psRNATarget