ncRNA ID | osa-miR6251 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr9:15792337-15792550 [+] |
Reference genome | MSU7 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 11 - UGUGUAGCCACAUUGUAAGGG - 31 |
Stem-loop(if miRNA) |
-                     A       -  A       U  A   ---    - A CUCGCAGAAAGCCCACUGCAAUCCAAAUCUUCUUCACGAUUGUUCCUAUUC  UGGCAUGCCAUGUGUAGCCAC UUGUAAG GG GUCCUUG GC CAU   GGUC A U                                                   A  ||||||||||||||||||||| ||||||| || ||||||| || |||   |||| | |                                                   C  ACCGUACGGUGUACAUCGGUG GACGUUC CC CAGGGAC CG GUA   ACAA C G                                                   C C                     C       A  -       C  -   CCU    U - UUGUCGUUGUCUCCCUUUACCACCCGCCAGUAAGCUCUUCUGCCCACUAAA |
Stem-loop sequence | UGGCAUGCCAUGUGUAGCCACAUUGUAAGGGAGUCCUUGUGCACAUGGUCAAUCUCGCAGAAAGCCCACUGCAAUCCAAAUCUUCUUCACGAUUGUUCCUAUUCACCAAAUCACCCGUCUUCUCGAAUGACCGCCCACCAUUUCCCUCUGUUGCUGUUGCUAACAUCCAUGGCCCAGGGACCCACUUGCAGCGUGGCUACAUGUGGCAUGCCAC |
1 | PMID:22585409
"Novel miRNAs in the control of arsenite levels in rice"; Liu Q; Funct Integr Genomics. 12:649-658(2012). |