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BaseInfo

ncRNA ID osa-miR6251
Species Oryza sativa
Class miRNA
Genome position Chr9:15792337-15792550 [+]
Reference genome MSU7
Source miRBase
Length 21
Mature sequence(if miRNA) 11 - UGUGUAGCCACAUUGUAAGGG - 31
Stem-loop(if miRNA) -                     A       -  A       U  A   ---    - A CUCGCAGAAAGCCCACUGCAAUCCAAAUCUUCUUCACGAUUGUUCCUAUUC
 UGGCAUGCCAUGUGUAGCCAC UUGUAAG GG GUCCUUG GC CAU   GGUC A U                                                   A
 ||||||||||||||||||||| ||||||| || ||||||| || |||   |||| | |                                                   C
 ACCGUACGGUGUACAUCGGUG GACGUUC CC CAGGGAC CG GUA   ACAA C G                                                   C
C                     C       A  -       C  -   CCU    U - UUGUCGUUGUCUCCCUUUACCACCCGCCAGUAAGCUCUUCUGCCCACUAAA
Stem-loop sequence UGGCAUGCCAUGUGUAGCCACAUUGUAAGGGAGUCCUUGUGCACAUGGUCAAUCUCGCAGAAAGCCCACUGCAAUCCAAAUCUUCUUCACGAUUGUUCCUAUUCACCAAAUCACCCGUCUUCUCGAAUGACCGCCCACCAUUUCCCUCUGUUGCUGUUGCUAACAUCCAUGGCCCAGGGACCCACUUGCAGCGUGGCUACAUGUGGCAUGCCAC

Reference

1 PMID:22585409
"Novel miRNAs in the control of arsenite levels in rice";
Liu Q;
Funct Integr Genomics. 12:649-658(2012).