ncRNA ID | novel_zma_miR3648 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr1:232640721-232640784 [+] |
Reference genome | RefGen_v4 |
Source | SRR2287031 |
Length | 20 |
Mature sequence(if miRNA) | 45 - UGCGCGCCACGUCAGUGCAA - 64 |
Stem-loop(if miRNA) |
--CU       A   -A             - A     GCUGGCG UGG  CGCACCGGACAGU C C     ||||||| |||  ||||||||||||| | U     UGACUGC ACC  GCGUGGCCUGUCA G G AACG       -   GC             C U |
Stem-loop sequence | CUGCUGGCGAUGGACGCACCGGACAGUCACUGUGCACUGUCCGGUGCGCGCCACGUCAGUGCAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_020541939.1 |
|
1.0 | PREDICTED: Zea mays uncharacterized LOC100272534 (LOC100272534), transcript variant X2, mRNA | NA | coding protein | psRNATarget | |||||||||
XM_020541938.1 |
|
1.0 | PREDICTED: Zea mays uncharacterized LOC100272534 (LOC100272534), transcript variant X1, mRNA | NA | coding protein | psRNATarget |