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BaseInfo

ncRNA ID novel_zma_miR3647
Species Zea mays
Class miRNA
Genome position Chr9:42703263-42703481 [-]
Reference genome RefGen_v4
Source SRR1583944;SRR2638137;SRR2647387;SRR2647388;SRR2647391
Length 23
Mature sequence(if miRNA) 197 - AAUGAUCUCCAGUUUUUACGCAG - 219
Stem-loop(if miRNA) --        C                                   C                 G   U  A          A     A   -------G        --G   
  AAUGAUCU CAGUUUUUACGCAGACCUUCUCUUAGCUAAAUUAA AUAUAUAAAUAUUUUCA AAU UU UGAGAACUUU AAUCU GAA        UAUAUAAA   UUCU
  |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| || |||||||||| ||||| |||        ||||||||   |||G
  UUACUAGA GUUAAAAAUGUGUUUGGAAGAGAAUCGAUUUAAUU UAUGUGUUUAUAAAAGU UUA AA ACUCUUGAAA UUAGA CUU        AUGUAUUU   AAGA
UU        A                                   A                 A   U  A          C     -   GGUAUUAA        AUA   
Stem-loop sequence AAUGAUCUCCAGUUUUUACGCAGACCUUCUCUUAGCUAAAUUAACAUAUAUAAAUAUUUUCAGAAUUUUAUGAGAACUUUAAAUCUAGAAGUAUAUAAAGUUCUGAGAAAUAUUUAUGUAAAUUAUGGUUCAGAUUCAAAGUUCUCAAAAUAUUAUGAAAAUAUUUGUGUAUAUUAAUUUAGCUAAGAGAAGGUUUGUGUAAAAAUUGAAGAUCAUUUU