ncRNA ID | novel_zma_miR3646 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr9:150749670-150749755 [+] |
Reference genome | RefGen_v4 |
Source | SRR2287031;SRR2287163 |
Length | 24 |
Mature sequence(if miRNA) | 63 - UACUGAGAAUUUUAUUGAAGAUGA - 86 |
Stem-loop(if miRNA) |
--    AG            U    U ---A   -AA       U   AUCU  AAUAGGAUUUUC GUAG G    UUU   GUUUUUU U   ||||  |||||||||||| |||| |    |||   |||||||   UAGA  UUAUUUUAAGAG CAUC C    GAG   UAAGAAG U AG    AG            U    C GGGG   GAC       U |
Stem-loop sequence | AUCUAGAAUAGGAUUUUCUGUAGUGAUUUAAGUUUUUUUUUUGAAGAAUCAGGAGGGGGCCCUACUGAGAAUUUUAUUGAAGAUGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_008647735.2 |
|
3.0 | PREDICTED: Zea mays gibberellin 2-beta-dioxygenase 8 (LOC103627438), transcript variant X1, mRNA | NA | coding protein | psRNATarget | |||||||||
XM_008647736.2 |
|
3.0 | PREDICTED: Zea mays gibberellin 2-beta-dioxygenase 8 (LOC103627438), transcript variant X2, mRNA | NA | coding protein | psRNATarget |