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BaseInfo

ncRNA ID	novel_zma_miR3642
Species	Zea mays
Class	miRNA
Genome position	Chr9:125442314-125442381 [+]
Reference genome	RefGen_v4
Source	SRR2287031
Length	24
Mature sequence(if miRNA)	45 - ACUCGUGUUGGUCUGUGGAGAUGG - 68
Stem-loop(if miRNA)	--      U    UGC        GAAAAUAAAG   GUUUUC CGGG   GCAUGAGU          U   |||||| ||||   ||||||||   UAGAGG GUCU   UGUGCUCA          G GG      U    GGU        GAAAACACUU
Stem-loop sequence	GUUUUCUCGGGUGCGCAUGAGUGAAAAUAAAGUGUUCACAAAAGACUCGUGUUGGUCUGUGGAGAUGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT069211.2	ncRNA:24   GGUAGAGGUGUCUGGUUGUGCUCA   1   =||||*|||||||||||||||||| targets:687   UCAUCCCCACAGACCAACACGAGU   710 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFb0334L03 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001147964.1	ncRNA:24   GGUAGAGGUGUCUGGUUGUGCUCA   1   =|=||*|=|||||||||||||||| targets:2327   UCGUCCCUACAGACCAACACGAGU   2350 Target Full Sequence	2.0	Zea mays Pentatricopeptide repeat-containing protein mitochondrial (LOC100273546), mRNA	NA	coding protein	psRNATarget
BT041365.1	ncRNA:24   GGUAGAGGUGUCUGGUUGUGCUCA   1   =|=||*|=|||||||||||||||| targets:2327   UCGUCCCUACAGACCAACACGAGU   2350 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0056K22 mRNA, complete cds	NA	coding protein	psRNATarget