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BaseInfo

ncRNA ID	novel_zma_miR3634
Species	Zea mays
Class	miRNA
Genome position	Chr1:209968400-209968516 [+]
Reference genome	RefGen_v4
Source	SRR2287031
Length	24
Mature sequence(if miRNA)	1 - AGGCGCGGACGGUCCACGGCCCAG - 24
Stem-loop(if miRNA)	--   -       G    AC     A     --    G       A      GC   -   G   AGG CGCGGAC GUCC  GGCCC GGGCC  GGAC GUCCGCG CCUGGC  GAG GCG C   ||| ||||||| ||||  ||||| |||||  |||| ||||||| ||||||  ||| |||   UCC GCGCCUG CAGG  CCGGG UCCGG  CCUG CAGGCGC GGACUG  CUC CGU G GG   A       G    --     G     CG    G       -      GU   U   G
Stem-loop sequence	AGGCGCGGACGGUCCACGGCCCAGGGCCGGACGGUCCGCGACCUGGCGCGAGGCGGCGGUGCUCUCUGGUCAGGCGCGGACGGUCCGCGGCCUGGGGCCGGACGGUCCGCGACCUGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EZ096610.1	ncRNA:24   GACCCGGCACCUGGCAGGCGCGGA   1   |||*||||*||||||||||||=|| targets:15   CUGUGCCGCGGACCGUCCGCGUCU   38 Target Full Sequence	2.5	TSA: Zea mays contig32265, mRNA sequence	NA	coding protein	psRNATarget
EZ096610.1	ncRNA:24   GACCCGGCACCUGGCAGGCGCGGA   1   |***||||*||||=|||||||||| targets:86   CCAAGCCGCGGACUGUCCGCGCCU   109 Target Full Sequence	2.5	TSA: Zea mays contig32265, mRNA sequence	NA	coding protein	psRNATarget
JB163540.1	ncRNA:24   GACCCGGCACCUGGCAGGCGCGGA   1   ||*|*|||*||||||||||||||| targets:37   CUUGACCGCGGACCGUCCGCGCCU   60 Target Full Sequence	1.0	Sequence 1204 from Patent EP2559767	NA	coding protein	psRNATarget
HI403079.1	ncRNA:24   GACCCGGCACCUGGCAGGCGCGGA   1   ||*|*|||*||||||||||||||| targets:37   CUUGACCGCGGACCGUCCGCGCCU   60 Target Full Sequence	1.0	Sequence 1204 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235209.1	ncRNA:24   GACCCGGCACCUGGCAGGCGCGGA   1   ||*|*|||*||||||||||||||| targets:37   CUUGACCGCGGACCGUCCGCGCCU   60 Target Full Sequence	1.0	Sequence 1204 from Patent EP2985353	NA	coding protein	psRNATarget
HI409768.1	ncRNA:24   GACCCGGCACCUGGCAGGCGCGGA   1   ||*||=|**||||||||||||||| targets:36   CUCGGUCACGGACCGUCCGCGCCU   59 Target Full Sequence	3.0	Sequence 7893 from Patent EP2074227	NA	coding protein	psRNATarget
JB170229.1	ncRNA:24   GACCCGGCACCUGGCAGGCGCGGA   1   ||*||=|**||||||||||||||| targets:36   CUCGGUCACGGACCGUCCGCGCCU   59 Target Full Sequence	3.0	Sequence 7893 from Patent EP2559767	NA	coding protein	psRNATarget
LQ241898.1	ncRNA:24   GACCCGGCACCUGGCAGGCGCGGA   1   ||*||=|**||||||||||||||| targets:36   CUCGGUCACGGACCGUCCGCGCCU   59 Target Full Sequence	3.0	Sequence 7893 from Patent EP2985353	NA	coding protein	psRNATarget
BT039435.1	ncRNA:24   GACCCGGCACCUGGCAGGCGCGGA   1   |***||||*||||||||||||||| targets:295   CCUAGCCGCGGACCGUCCGCGCCU   318 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFc0013G13 mRNA, complete cds	NA	coding protein	psRNATarget