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BaseInfo

ncRNA ID novel_zma_miR3631
Species Zea mays
Class miRNA
Genome position Chr9:39409280-39409339 [+]
Reference genome RefGen_v4
Source SRR2287031
Length 24
Mature sequence(if miRNA) 37 - AUGGACAACUGUAGGUGGGCCUAA - 60
Stem-loop(if miRNA) --              GGU     GAG    
  AGGUUCACCUACAG   UGUCU   GUCCG
  ||||||||||||||   |||||   ||||A
  UCCGGGUGGAUGUC   ACAGG   UAGGU
AA              --A     -UA    
Stem-loop sequence AGGUUCACCUACAGGGUUGUCUGAGGUCCGAUGGAUAUGGACAACUGUAGGUGGGCCUAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ106947.1
ncRNA:24   AAUCCGGGUGGAUGUCAACAGGUA   1
  ||||||||=|||||||||||||*|
targets:166   UUAGGCCCGCCUACAGUUGUCCUU   189

2.5 TSA: Zea mays contig42605, mRNA sequence NA coding protein psRNATarget
BT038945.1
ncRNA:24   AAUCCGGGUGGAUGUCAACAGGUA   1
  *|||||||||||||||||||||*|
targets:624   CUAGGCCCACCUACAGUUGUCCUU   647

1.5 Zea mays full-length cDNA clone ZM_BFb0341N05 mRNA, complete cds NA coding protein psRNATarget