ncRNA ID | novel_zma_miR3618 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr9:114754436-114754529 [-] |
Reference genome | RefGen_v4 |
Source | SRR2287031;SRR4237221;SRR4237223 |
Length | 23 |
Mature sequence(if miRNA) | 1 - AGAAGCGCACAGAUGAAGUCGGG - 23 |
Stem-loop(if miRNA) |
--                              U             U   CGGCUUCAUCUGUGCGCUUCUCUUCUCUUA GUGGGCUGCUAAG G   |||||||||||||||||||||||||||||| |||||||||||||   GCUGAAGUAGACACGCGAAGAGAAGAGAAU CACCCGACGAUUC C GG                              C             U |
Stem-loop sequence | CGGCUUCAUCUGUGCGCUUCUCUUCUCUUAUGUGGGCUGCUAAGUGCUCUUAGCAGCCCACCUAAGAGAAGAGAAGCGCACAGAUGAAGUCGGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_020538582.1 |
|
2.0 | PREDICTED: Zea mays B3 domain-containing protein Os02g0598200 (LOC103628738), transcript variant X2, mRNA | NA | coding protein | psRNATarget | |||||||||
XM_020538581.1 |
|
2.0 | PREDICTED: Zea mays B3 domain-containing protein Os02g0598200 (LOC103628738), transcript variant X1, mRNA | NA | coding protein | psRNATarget |