ncRNA ID | novel_zma_miR3604 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr8:3296058-3296147 [+] |
Reference genome | RefGen_v4 |
Source | SRR2287031;SRR2287159;SRR2287161;SRR2287162 |
Length | 21 |
Mature sequence(if miRNA) | 1 - AAAUAUCAUUUUAGGACUACA - 21 |
Stem-loop(if miRNA) |
--      C     A      C                    G A   AAAUAU AUUUU GGACUA AAAUAGGUUGAAAUAAGCUA U U   |||||| ||||| |||||| |||||||||||||||||||| |   UUUAUA UAAAA CCUGGU UUUAUUCGACUUUAUUCGAU A U AU      A     C      A                    G G |
Stem-loop sequence | AAAUAUCAUUUUAGGACUACAAAUAGGUUGAAAUAAGCUAGUAUUGAGUAGCUUAUUUCAGCUUAUUUAUGGUCCCAAAAUAAUAUUUUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_001139196.1 |
|
2.5 | Zea mays OSJNBa0029H02.27-like protein (pco137821), mRNA | NA | coding protein | psRNATarget | |||||||||
BT036602.1 |
|
2.5 | Zea mays full-length cDNA clone ZM_BFb0125H01 mRNA, complete cds | NA | coding protein | psRNATarget |