ncRNA ID | novel_zma_miR3600 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr1:179648504-179648595 [+] |
Reference genome | RefGen_v4 |
Source | SRR2287031;SRR2287162 |
Length | 24 |
Mature sequence(if miRNA) | 69 - AAACUGGAGAAACCUAACAAGCGG - 92 |
Stem-loop(if miRNA) |
-- G    AG     -    GA      ----UUUGUUA   G    UC   G UUGU  AGGUU CUUU  UUUGGU           GUC CCCU  C   | ||||  ||||| ||||  ||||||           ||| ||||   C AACA  UCCAA GAGG  AAACUA           UAG GGGG  U GG G    -A     A    UC      UUUGUGUUAUG   A    UC |
Stem-loop sequence | GGUUGUAGAGGUUCUUUGAUUUGGUUUUGUUAGUCGCCCUUCCUCUGGGGAGAUGUAUUGUGUUUAUCAAACUGGAGAAACCUAACAAGCGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_020542196.1 |
|
2.0 | PREDICTED: Zea mays OSJNBa0059D20.8-like protein (LOC100304325), transcript variant X6, mRNA | NA | coding protein | psRNATarget |