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BaseInfo

ncRNA ID	osa-miR1861m
Species	Oryza sativa
Class	miRNA
Genome position	Chr9:13532649-13532744 [+]
Reference genome	MSU7
Source	miRBase
Length	22
Mature sequence(if miRNA)	18 - CGGUCUUGUGGCAAGAACUGAG - 39
Stem-loop(if miRNA)	U         UUAG  C                    A    UU  UU  UGCAUAUUC    GC CGGUCUUGUGGCAAGAACUG GUAG  CG  A  |||||||||    || |||||||||||||||||||| ||||  ||  ACGUAUAAG    UG GCCAGAACACUGUUCUUGGC CAUU  GC  A A         UAUA  A                    C    --  UC
Stem-loop sequence	UUGCAUAUUCUUAGGCCCGGUCUUGUGGCAAGAACUGAGUAGUUCGUUAACUCGUUACCCGGUUCUUGUCACAAGACCGAGUAUAUGAAUAUGCAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
HI404181.1	ncRNA:22   GAGUCAAGAACGGUGUUCUGGC   1   |*|=|||||||=|||||||||| targets:48   CGCGGUUCUUGUCACAAGACCG   69 Target Full Sequence	2.5	Sequence 2306 from Patent EP2074227	NA	coding protein	psRNATarget
LQ236166.1	ncRNA:22   GAGUCAAGAACGGUGUUCUGGC   1   |*|=|||||||=|||||||||| targets:48   CGCGGUUCUUGUCACAAGACCG   69 Target Full Sequence	2.5	Sequence 2161 from Patent EP2985353	NA	coding protein	psRNATarget
HI403891.1	ncRNA:22   GAGUCAAGAACGGUGUUCUGGC   1   |*|=|||||||=|||||||||| targets:48   CGCGGUUCUUGUCACAAGACCG   69 Target Full Sequence	2.5	Sequence 2016 from Patent EP2074227	NA	coding protein	psRNATarget
LQ236311.1	ncRNA:22   GAGUCAAGAACGGUGUUCUGGC   1   |*|=|||||||=|||||||||| targets:48   CGCGGUUCUUGUCACAAGACCG   69 Target Full Sequence	2.5	Sequence 2306 from Patent EP2985353	NA	coding protein	psRNATarget
HI404304.1	ncRNA:22   GAGUCAAGAACGGUGUUCUGGC   1   |*|=|||||||=|||||||||| targets:48   CCCGGUUCUUGUCACAAGACCG   69 Target Full Sequence	2.5	Sequence 2429 from Patent EP2074227	NA	coding protein	psRNATarget
LQ236021.1	ncRNA:22   GAGUCAAGAACGGUGUUCUGGC   1   |*|=|||||||=|||||||||| targets:48   CGCGGUUCUUGUCACAAGACCG   69 Target Full Sequence	2.5	Sequence 2016 from Patent EP2985353	NA	coding protein	psRNATarget
JB164497.1	ncRNA:22   GAGUCAAGAACGGUGUUCUGGC   1   |*|=|||||||=|||||||||| targets:48   CGCGGUUCUUGUCACAAGACCG   69 Target Full Sequence	2.5	Sequence 2161 from Patent EP2559767	NA	coding protein	psRNATarget
JB164642.1	ncRNA:22   GAGUCAAGAACGGUGUUCUGGC   1   |*|=|||||||=|||||||||| targets:48   CGCGGUUCUUGUCACAAGACCG   69 Target Full Sequence	2.5	Sequence 2306 from Patent EP2559767	NA	coding protein	psRNATarget
JB164765.1	ncRNA:22   GAGUCAAGAACGGUGUUCUGGC   1   |*|=|||||||=|||||||||| targets:48   CCCGGUUCUUGUCACAAGACCG   69 Target Full Sequence	2.5	Sequence 2429 from Patent EP2559767	NA	coding protein	psRNATarget
HI404036.1	ncRNA:22   GAGUCAAGAACGGUGUUCUGGC   1   |*|=|||||||=|||||||||| targets:48   CGCGGUUCUUGUCACAAGACCG   69 Target Full Sequence	2.5	Sequence 2161 from Patent EP2074227	NA	coding protein	psRNATarget
JB164352.1	ncRNA:22   GAGUCAAGAACGGUGUUCUGGC   1   |*|=|||||||=|||||||||| targets:48   CGCGGUUCUUGUCACAAGACCG   69 Target Full Sequence	2.5	Sequence 2016 from Patent EP2559767	NA	coding protein	psRNATarget
LQ236434.1	ncRNA:22   GAGUCAAGAACGGUGUUCUGGC   1   |*|=|||||||=|||||||||| targets:48   CCCGGUUCUUGUCACAAGACCG   69 Target Full Sequence	2.5	Sequence 2429 from Patent EP2985353	NA	coding protein	psRNATarget

Reference

1	PMID:18687877 "A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains"; Zhu QH, Spriggs A, Matthew L, Fan L, Kennedy G, Gubler F, Helliwell C; Genome Res. 18:1456-1465(2008).
2	PMID:22158467 "Massive analysis of rice small RNAs: mechanistic implications of regulated microRNAs and variants for differential target RNA cleavage"; Jeong DH, Park S, Zhai J, Gurazada SG, De Paoli E, Meyers BC, Green PJ; Plant Cell. 23:4185-4207(2011).