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BaseInfo

ncRNA ID novel_zma_miR3593
Species Zea mays
Class miRNA
Genome position Chr8:106707339-106707442 [-]
Reference genome RefGen_v4
Source SRR2287031;SRR2287162
Length 24
Mature sequence(if miRNA) 81 - AAUAGGAUGUUUCCACUGACGGUU - 104
Stem-loop(if miRNA) --                  A     AA  UAAGA                U
  AAUAGGAUGUUUCCACUG CGGUU  GU     CAACCGCUAGUGGAAA C
  |||||||||||||||||| |||||  ||     ||||||||||||||||
  UUAUCCUACAAAGGUGAC GCCAA  CA     GUUGGCGGUCACUUUU A
CU                  C     CA  UUGUG                A
Stem-loop sequence AAUAGGAUGUUUCCACUGACGGUUAAGUUAAGACAACCGCUAGUGGAAAUCAAUUUUCACUGGCGGUUGGUGUUACACAACCGCCAGUGGAAACAUCCUAUUUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ101180.1
ncRNA:24   UUGGCAGUCACCUUUGUAGGAUAA   1
  |||||*|||||||||=||||||||
targets:81   AACCGCCAGUGGAAAUAUCCUAUU   104

2.5 TSA: Zea mays contig36836, mRNA sequence NA coding protein psRNATarget