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BaseInfo

ncRNA ID	novel_zma_miR3591
Species	Zea mays
Class	miRNA
Genome position	Chr9:92824077-92824150 [-]
Reference genome	RefGen_v4
Source	SRR1583944;SRR2647387;SRR1583943
Length	24
Mature sequence(if miRNA)	1 - GACUAGGAGGGGAUUUAAUCUCCU - 24
Stem-loop(if miRNA)	C  CAUCCACUCCUAGUCAAUUUUGACUAGAA GGGA UA                             G |||| ||                             G UCCU CU                             G     -  AAUUUAGGGGAGGAUCAGCUCUAAUUUAG
Stem-loop sequence	GGGACUACAUCCACUCCUAGUCAAUUUUGACUAGAAGGGGAUUUAAUCUCGACUAGGAGGGGAUUUAAUCUCCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008670947.1	ncRNA:24   UCCUCUAAUUUAGGGGAGGAUCAG   1   |||=|||||||||||=|||||||| targets:604   AGGGGAUUAAAUCCCUUCCUAGUC   627 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103646219 (LOC103646219), mRNA	NA	coding protein	psRNATarget
EZ093244.1	ncRNA:24   UCCUCUAAUUUAGGGGAGGAUCAG   1   |||=|||||||||||||||||*|= targets:29   AGGGGAUUAAAUCCCCUCCUAUUU   52 Target Full Sequence	2.5	TSA: Zea mays contig28894, mRNA sequence	NA	coding protein	psRNATarget
XM_020552749.1	ncRNA:24   UCCUCUAAUUUAGGGGAGGAUCAG   1   |||=|||||||||||||||||*|= targets:3225   AGGGGAUUAAAUCCCCUCCUAUUU   3248 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103654236 (LOC103654236), mRNA	NA	coding protein	psRNATarget
EU950695.1	ncRNA:24   UCCUCUAAUUUAGGGGAGGAUCAG   1   |||-|||||||||||=|||||||= targets:611   AGG-GAUUAAAUCCCUUCCUAGUU   633 Target Full Sequence	2.5	Zea mays clone 509921 mRNA sequence	NA	coding protein	psRNATarget
EZ095217.1	ncRNA:24   UCCUCUAAUUUAGGGGAGGAUCAG   1   |||=|*||||||||||*||||||| targets:73   AGGGGUUUAAAUCCCCGCCUAGUC   96 Target Full Sequence	2.5	TSA: Zea mays contig30870, mRNA sequence	NA	coding protein	psRNATarget
BT063242.2	ncRNA:24   UCCUCUAAUUUAGGGGAGGAUCAG   1   ||*=||||*||||||||=|||||| targets:501   AGAGGAUUUAAUCCCCUUCUAGUC   524 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0042E19 mRNA, complete cds	NA	coding protein	psRNATarget
JB163489.1	ncRNA:24   UCCUCUAAUUUAGGGGAGGAUCAG   1   ||*=||||*|||||||*||||||| targets:36   AGAGGAUUUAAUCCCCGCCUAGUC   59 Target Full Sequence	2.5	Sequence 1153 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235158.1	ncRNA:24   UCCUCUAAUUUAGGGGAGGAUCAG   1   ||*=||||*|||||||*||||||| targets:36   AGAGGAUUUAAUCCCCGCCUAGUC   59 Target Full Sequence	2.5	Sequence 1153 from Patent EP2985353	NA	coding protein	psRNATarget
HI403028.1	ncRNA:24   UCCUCUAAUUUAGGGGAGGAUCAG   1   ||*=||||*|||||||*||||||| targets:36   AGAGGAUUUAAUCCCCGCCUAGUC   59 Target Full Sequence	2.5	Sequence 1153 from Patent EP2074227	NA	coding protein	psRNATarget
BT067503.1	ncRNA:24   UCCUCUAAUUUAGGGGAGGAUCAG   1   |||=*|||||*||||||||||*|| targets:859   AGGGAAUUAAUUCCCCUCCUAUUC   882 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0066C23 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001176181.1	ncRNA:24   UCCUCUAAUUUAGGGGAGGAUCAG   1   |||=*|||||*||||||||||*|| targets:859   AGGGAAUUAAUUCCCCUCCUAUUC   882 Target Full Sequence	2.5	Zea mays uncharacterized LOC100383533 (LOC100383533), mRNA	NA	coding protein	psRNATarget