ncRNA ID | osa-miR1861l |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr9:13532426-13532554 [+] |
Reference genome | MSU7 |
Source | miRBase |
Length | 22 |
Mature sequence(if miRNA) | 23 - CGAUCUUGAGGCAGGAACUGAG - 44 |
Stem-loop(if miRNA) |
UG -GC U A A A U CUC UCU UCG UU AUAUUC UAGGCCCGAUCUUG GGCAGGAACUG GU GU GGUGAA GC A ||| || |||||| |||||||||||||| ||||||||||| || || |||||| || AGU AA UAUAAG GUCUGGGCUAGAAC CUGUCCUUGGC CA CG UCACUU UG U GU ACA U C A G C ACU UUG |
Stem-loop sequence | UCGUGUUGCAUAUUCUUAGGCCCGAUCUUGAGGCAGGAACUGAGUAGUUGGUGAACUCGCUCUAUGUUGUUCAUUCACUCGCGACACGGUUCCUGUCCCAAGAUCGGGUCUGUGAAUAUACAAAUGUGA |
1 | PMID:18687877
"A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains"; Zhu QH, Spriggs A, Matthew L, Fan L, Kennedy G, Gubler F, Helliwell C; Genome Res. 18:1456-1465(2008). |
2 | PMID:22158467
"Massive analysis of rice small RNAs: mechanistic implications of regulated microRNAs and variants for differential target RNA cleavage"; Jeong DH, Park S, Zhai J, Gurazada SG, De Paoli E, Meyers BC, Green PJ; Plant Cell. 23:4185-4207(2011). |