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BaseInfo

ncRNA ID novel_zma_miR3584
Species Zea mays
Class miRNA
Genome position Chr8:172370910-172371014 [-]
Reference genome RefGen_v4
Source SRR2287031;SRR2287159
Length 24
Mature sequence(if miRNA) 1 - GGUUGAAGAGUAGAAUAGAGCAGA - 24
Stem-loop(if miRNA) -UG           G        ---------       -----       A   U  G
   GUUCUAUUCUA UUUUCGAU         AAUGGAG     UCGUUCU UUU UC U
   ||||||||||| ||||||||         |||||||     ||||||| ||| ||
   CGAGAUAAGAU AGAAGUUG         UUAUCUC     GGCAAGA AAA GG U
AGA           G        GUUUGUUUU       CCUAA       C   C  U
Stem-loop sequence UGGUUCUAUUCUAGUUUUCGAUAAUGGAGUCGUUCUAUUUUUCGUUUGGCAAACAGAACGGAAUCCCUCUAUUUUUUGUUUGGUUGAAGAGUAGAAUAGAGCAGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU945197.1
ncRNA:24   AGACGAGAUAAGAUGAGAAGUUGG   1
  ||*|||||||||||||||||||||
targets:106   UCCGCUCUAUUCUACUCUUCAACC   129

0.0 Zea mays clone 244184 mRNA sequence NA coding protein psRNATarget
BT084215.2
ncRNA:24   AGACGAGAUAAGAUGAGAAGUUGG   1
  ||**|||||||||||||||||||*
targets:1038   UCCACUCUAUUCUACUCUUCAACG   1061

1.0 Zea mays full-length cDNA clone ZM_BFb0090B20 mRNA, complete cds NA coding protein psRNATarget